HaloWeb: the haloarchaeal genomes database

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HaloWeb: the haloarchaeal genomes database

BACKGROUND Complete genome sequencing together with post-genomic studies provide the opportunity for a comprehensive 'systems biology' understanding of model organisms. For maximum effectiveness, an integrated database containing genomic, transcriptomic, and proteomic data is necessary. DESCRIPTION To improve data access and facilitate functional genomic studies on haloarchaea in our laborato...

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Sequencing of Seven Haloarchaeal Genomes Reveals Patterns of Genomic Flux

We report the sequencing of seven genomes from two haloarchaeal genera, Haloferax and Haloarcula. Ease of cultivation and the existence of well-developed genetic and biochemical tools for several diverse haloarchaeal species make haloarchaea a model group for the study of archaeal biology. The unique physiological properties of these organisms also make them good candidates for novel enzyme dis...

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Novel Insights into the Diversity of Catabolic Metabolism from Ten Haloarchaeal Genomes

BACKGROUND The extremely halophilic archaea are present worldwide in saline environments and have important biotechnological applications. Ten complete genomes of haloarchaea are now available, providing an opportunity for comparative analysis. METHODOLOGY/PRINCIPAL FINDINGS We report here the comparative analysis of five newly sequenced haloarchaeal genomes with five previously published one...

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AMiGA: the arthropodan mitochondrial genomes accessible database

UNLABELLED The Arthropodan Mitochondrial Genomes Accessible database (AMiGA) is a relational database developed to help in managing access to the increasing amount of data arising from developments in arthropodan mitochondrial genomics (136 mitochondrial genomes as of September 2005). The strengths of AMiGA include (1) a more accessible and up-to-date database containing a more comprehensive se...

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The haloarchaeal chromosome replication machinery.

The powerful combination of genetic and biochemical analysis has provided many key insights into the structure and function of the chromosomal DNA replication machineries of bacterial and eukaryotic cells. In contrast, in the archaea, biochemical studies have dominated, mainly due to the absence of efficient genetic systems for these organisms. This situation is changing, however, and, in this ...

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ژورنال

عنوان ژورنال: Saline Systems

سال: 2010

ISSN: 1746-1448

DOI: 10.1186/1746-1448-6-12